Anise · mRNA

Chr06.g45378.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,789
bp
Chr06:20,073,597–20,076,385
genomic location
Record overview

Feature identity

Identifier
Chr06.g45378.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,789 bp
Genomic location
Chr06:20,073,597–20,076,385
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_15s0048g02720.t01,I,[3-ketoacyl-coa synthase]
Gene Ontology
3-ketoacyl-coa synthase | GO:0006950//response to stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009266//response to temperature stimulus; GO:0009314//response to radiation; GO:0009409//response to cold; GO:0009416//response to light stimulus; GO:0009628//response to abiotic stimulus; GO:0010025//wax biosynthetic process; GO:0010166//wax metabolic process; GO:0050896//response to stimulus; GO:0071704//organic substance metabolic process; GO:1901568//fatty acid derivative metabolic process; GO:1901570//fatty acid derivative biosynthetic process; GO:1901576//organic substance biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005783//endoplasmic reticulum; GO:0005829//cytosol; GO:0005840//ribosome; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0022626//cytosolic ribosome; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044445//cytosolic part; GO:0044464//cell part; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004312//fatty acid synthase activity; GO:0009922//fatty acid elongase activity; GO:0016740//transferase activity; GO:0016746//transferase activity, transferring acyl groups; GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups
KEGG
K15397 | KCS
NR
XP_034709677.1 3-ketoacyl-CoA synthase 1 [Vitis riparia]
Swiss-Prot
Q9MAM3.1 RecName: Full=3-ketoacyl-CoA synthase 1; Short=KCS-1; AltName: Full=Very long-chain fatty acid condensing enzyme 1; Short=VLCFA condensing enzyme 1 [Arabidopsis thaliana]
Biological context

Connected feature records

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