Feature identity
- Identifier
- PaHa_c165g00030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 438 bp
- Genomic location
- unplaced_contig_165:5,738–6,175
- Strand
- +
Hass · mRNA
PaHa_c165g00030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 438
- bp
- unplaced_contig_165:5,738–6,175
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c165g00030
- eggNOG
- Preferred name: MED11 | Seed ortholog: 1043005.A0A074Y589 | COG: S | eggNOG OG: Med11@2759|A-1
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001097 TFIIH-class transcription factor complex binding; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0032968 positive regulation of transcription elongation by RNA polymerase II; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0051123 RNA polymerase II preinitiation complex assembly; GO:0060261 positive regulation of transcription initiation by RNA polymerase II; GO:0070847 core mediator complex
- KEGG
- KO: K15132 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c165g00030.1-protein
derives_fromgenePaHa_c165g00030
CDS
part_ofPaHa_c165g00030.1-CDS-unplaced_contig_165-1787993825:5738..6175exon
part_ofPaHa_c165g00030.1-exon-unplaced_contig_165-1787993825:5738..6175