Feature identity
- Identifier
- PaHa_c171g00450.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 450 bp
- Genomic location
- unplaced_contig_171:47,136–47,585
- Strand
- −
Hass · mRNA
PaHa_c171g00450.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 450
- bp
- unplaced_contig_171:47,136–47,585
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c171g00450
- eggNOG
- Preferred name: TFC7 | Seed ortholog: 1043005.A0A074YUB8 | COG: COG0406 | eggNOG OG: His_Phos_1@131567|Mw-18
- Gene Ontology
- GO:0000127 transcription factor TFIIIC complex; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding; GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0008301 DNA binding, bending; GO:0016311 dephosphorylation; GO:0016791 phosphatase activity; GO:0042791 5S class rRNA transcription by RNA polymerase III
- KEGG
- EC: ec:2.8.1.14, ec:3.1.3.48 | KO: K11756, K15206 | BRITE: 00001, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c171g00450.1-protein
derives_fromgenePaHa_c171g00450
CDS
part_ofPaHa_c171g00450.1-CDS-unplaced_contig_171-1787993825:47136..47585exon
part_ofPaHa_c171g00450.1-exon-unplaced_contig_171-1787993825:47136..47585