Anise · mRNA

Chr03.g28687.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,216
bp
Chr03:88,371,147–88,372,362
genomic location
Record overview

Feature identity

Identifier
Chr03.g28687.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,216 bp
Genomic location
Chr03:88,371,147–88,372,362
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
102107.XP_008236445.1,K,[ZINC FINGER protein]
Gene Ontology
ZINC FINGER protein | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0006970//response to osmotic stress; GO:0006979//response to oxidative stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009266//response to temperature stimulus; GO:0009314//response to radiation; GO:0009409//response to cold; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009416//response to light stimulus; GO:0009611//response to wounding; GO:0009628//response to abiotic stimulus; GO:0009642//response to light intensity; GO:0009644//response to high light intensity; GO:0009651//response to salt stress; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010117//photoprotection; GO:0010200//response to chitin; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0015979//photosynthesis; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033993//response to lipid; GO:0035264//multicellular organism growth; GO:0040007//growth; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0044237//cellular metabolic process; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048589//developmental growth; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0097305//response to alcohol; GO:1901698//response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
RWR77991.1 zinc finger protein ZAT10 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q96289.1 RecName: Full=Zinc finger protein ZAT10; AltName: Full=Salt-tolerance zinc finger [Arabidopsis thaliana]
Biological context

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