Anise · mRNA

Chr02.g17933.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

420
bp
Chr02:81,937,465–81,940,736
genomic location
Record overview

Feature identity

Identifier
Chr02.g17933.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
420 bp
Genomic location
Chr02:81,937,465–81,940,736
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3983.cassava4.1_025768m,K,[High mobility group B protein]
Gene Ontology
High mobility group B protein | GO:0000003//reproduction; GO:0000902//cell morphogenesis; GO:0000904//cell morphogenesis involved in differentiation; GO:0003006//developmental process involved in reproduction; GO:0006082//organic acid metabolic process; GO:0006355//regulation of transcription, DNA-templated; GO:0006790//sulfur compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009653//anatomical structure morphogenesis; GO:0009826//unidimensional cell growth; GO:0009846//pollen germination; GO:0009856//pollination; GO:0009860//pollen tube growth; GO:0009889//regulation of biosynthetic process; GO:0009932//cell tip growth; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0016043//cellular component organization; GO:0016049//cell growth; GO:0016143//S-glycoside metabolic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019748//secondary metabolic process; GO:0019757//glycosinolate metabolic process; GO:0019760//glucosinolate metabolic process; GO:0022414//reproductive process; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032989//cellular component morphogenesis; GO:0040007//growth; GO:0043436//oxoacid metabolic process; GO:0044237//cellular metabolic process; GO:0044281//small molecule metabolic process; GO:0044706//multi-multicellular organism process; GO:0048468//cell development; GO:0048588//developmental cell growth; GO:0048589//developmental growth; GO:0048856//anatomical structure development; GO:0048868//pollen tube development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0060255//regulation of macromolecule metabolic process; GO:0060560//developmental growth involved in morphogenesis; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:1901135//carbohydrate derivative metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901657//glycosyl compound metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005623//cell; GO:0042995//cell projection; GO:0044464//cell part; GO:0090406//pollen tube; GO:0120025//plasma membrane bounded cell projection | GO:0000217//DNA secondary structure binding; GO:0000400//four-way junction DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
RWR74184.1 high mobility group B protein 15 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SKB7.1 RecName: Full=Type II inositol polyphosphate 5-phosphatase 14; Short=At5PTase14 [Arabidopsis thaliana]
Biological context

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