Feature identity
- Identifier
- PaHa_c222g00140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,259 bp
- Genomic location
- unplaced_contig_222:14,640–17,716
- Strand
- −
Hass · mRNA
PaHa_c222g00140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,259
- bp
- unplaced_contig_222:14,640–17,716
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c222g00140
- eggNOG
- Preferred name: PEX1 | Seed ortholog: 112498.A0A2D3UYJ9 | COG: COG0464 | eggNOG OG: AAA@131567|Aft-19, AAA@2759|FHE-26, AAA_lid_3@131567|BL-8, AAA_lid_3@2759|JH-13, PEX-1N@2759|A-1
- Gene Ontology
- GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005829 cytosol; GO:0006631 fatty acid metabolic process; GO:0016020 membrane; GO:0016558 protein import into peroxisome matrix; GO:0016562 protein import into peroxisome matrix, receptor recycling; GO:0016887 ATP hydrolysis activity; GO:0034599 cellular response to oxidative stress; GO:0043335 protein unfolding; GO:0046982 protein heterodimerization activity; GO:0140318 protein transporter activity; GO:0140567 membrane protein dislocase activity; GO:1904949 ATPase complex
- KEGG
- KO: K13338 | Pathway: 04146 | BRITE: 00001, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c222g00140.1-protein
derives_fromgenePaHa_c222g00140
CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:14640..14933CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:15131..15236CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:15611..16250CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:16324..16680CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:16778..17073CDS
part_ofPaHa_c222g00140.1-CDS-unplaced_contig_222-1787993825:17151..17716exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:14640..14933exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:15131..15236exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:15611..16250exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:16324..16680exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:16778..17073exon
part_ofPaHa_c222g00140.1-exon-unplaced_contig_222-1787993825:17151..17716