Anise · mRNA

Chr01.g08354.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,047
bp
Chr01:82,502,728–82,510,405
genomic location
Record overview

Feature identity

Identifier
Chr01.g08354.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,047 bp
Genomic location
Chr01:82,502,728–82,510,405
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010258783.1,K,[ethylene-responsive transcription factor]
Gene Ontology
ethylene-responsive transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0006952//defense response; GO:0008150//biological_process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009620//response to fungus; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010087//phloem or xylem histogenesis; GO:0010200//response to chitin; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032502//developmental process; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0043207//response to external biotic stimulus; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051301//cell division; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0098542//defense response to other organism; GO:1901698//response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | - | GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09286 | EREBP
NR
RWR80620.1 ethylene-responsive transcription factor 5 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q40478.1 RecName: Full=Ethylene-responsive transcription factor 5; AltName: Full=Ethylene-responsive element-binding factor 4; Short=EREBP-4; AltName: Full=Ethylene-responsive element-binding factor 5 homolog; AltName: Full=NtERF4 [Nicotiana tabacum]
Biological context

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