Anise · mRNA

Chr01.g00956.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,085
bp
Chr01:10,471,389–10,479,657
genomic location
Record overview

Feature identity

Identifier
Chr01.g00956.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
3,085 bp
Genomic location
Chr01:10,471,389–10,479,657
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
102107.XP_008245127.1,GI,[Saposin (B) Domains]
Gene Ontology
Saposin (B) Domains | GO:0000003//reproduction; GO:0001655//urogenital system development; GO:0001775//cell activation; GO:0002252//immune effector process; GO:0002263//cell activation involved in immune response; GO:0002274//myeloid leukocyte activation; GO:0002275//myeloid cell activation involved in immune response; GO:0002283//neutrophil activation involved in immune response; GO:0002366//leukocyte activation involved in immune response; GO:0002376//immune system process; GO:0002443//leukocyte mediated immunity; GO:0002444//myeloid leukocyte mediated immunity; GO:0002446//neutrophil mediated immunity; GO:0002576//platelet degranulation; GO:0003006//developmental process involved in reproduction; GO:0006629//lipid metabolic process; GO:0006643//membrane lipid metabolic process; GO:0006664//glycolipid metabolic process; GO:0006665//sphingolipid metabolic process; GO:0006687//glycosphingolipid metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006810//transport; GO:0006811//ion transport; GO:0006820//anion transport; GO:0006869//lipid transport; GO:0006887//exocytosis; GO:0006955//immune response; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007186//G-protein coupled receptor signaling pathway; GO:0007187//G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; GO:0007188//adenylate cyclase-modulating G-protein coupled receptor signaling pathway; GO:0007193//adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009888//tissue development; GO:0009894//regulation of catabolic process; GO:0009987//cellular process; GO:0010506//regulation of autophagy; GO:0010876//lipid localization; GO:0015711//organic anion transport; GO:0015849//organic acid transport; GO:0016192//vesicle-mediated transport; GO:0019216//regulation of lipid metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0023052//signaling; GO:0030154//cell differentiation; GO:0030850//prostate gland development; GO:0030855//epithelial cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031329//regulation of cellular catabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032940//secretion by cell; GO:0033036//macromolecule localization; GO:0035265//organ growth; GO:0035627//ceramide transport; GO:0036230//granulocyte activation; GO:0040007//growth; GO:0042119//neutrophil activation; GO:0042886//amide transport; GO:0043085//positive regulation of catalytic activity; GO:0043299//leukocyte degranulation; GO:0043312//neutrophil degranulation; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044255//cellular lipid metabolic process; GO:0045055//regulated exocytosis; GO:0045321//leukocyte activation; GO:0046836//glycolipid transport; GO:0046903//secretion; GO:0046942//carboxylic acid transport; GO:0048513//animal organ development; GO:0048589//developmental growth; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048732//gland development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050790//regulation of catalytic activity; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051716//cellular response to stimulus; GO:0060429//epithelium development; GO:0060736//prostate gland growth; GO:0060742//epithelial cell differentiation involved in prostate gland development; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0065009//regulation of molecular function; GO:0071702//organic substance transport; GO:0071704//organic substance metabolic process; GO:0071705//nitrogen compound transport; GO:0080090//regulation of primary metabolic process; GO:1901135//carbohydrate derivative metabolic process; GO:1901264//carbohydrate derivative transport; GO:1901564//organonitrogen compound metabolic process; GO:1903509//liposaccharide metabolic process; GO:1905572//ganglioside GM1 transport to membrane | GO:0000323//lytic vacuole; GO:0005575//cellular_component; GO:0005576//extracellular region; GO:0005615//extracellular space; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005764//lysosome; GO:0005765//lysosomal membrane; GO:0005766//primary lysosome; GO:0005773//vacuole; GO:0005774//vacuolar membrane; GO:0005775//vacuolar lumen; GO:0005886//plasma membrane; GO:0012505//endomembrane system; GO:0012506//vesicle membrane; GO:0016020//membrane; GO:0030141//secretory granule; GO:0030659//cytoplasmic vesicle membrane; GO:0030667//secretory granule membrane; GO:0031090//organelle membrane; GO:0031410//cytoplasmic vesicle; GO:0031974//membrane-enclosed lumen; GO:0031982//vesicle; GO:0035577//azurophil granule membrane; GO:0042582//azurophil granule; GO:0043202//lysosomal lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044421//extracellular region part; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044433//cytoplasmic vesicle part; GO:0044437//vacuolar part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0071944//cell periphery; GO:0097708//intracellular vesicle; GO:0098588//bounding membrane of organelle; GO:0098805//whole membrane; GO:0098852//lytic vacuole membrane; GO:0099503//secretory vesicle | GO:0001664//G-protein coupled receptor binding; GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565//beta-galactosidase activity; GO:0005102//receptor binding; GO:0005488//binding; GO:0005515//protein binding; GO:0005543//phospholipid binding; GO:0008047//enzyme activator activity; GO:0008289//lipid binding; GO:0015925//galactosidase activity; GO:0016787//hydrolase activity; GO:0016798//hydrolase activity, acting on glycosyl bonds; GO:0030234//enzyme regulator activity; GO:0031406//carboxylic acid binding; GO:0033218//amide binding; GO:0033293//monocarboxylic acid binding; GO:0035594//ganglioside binding; GO:0036094//small molecule binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0043167//ion binding; GO:0043168//anion binding; GO:0043177//organic acid binding; GO:0043208//glycosphingolipid binding; GO:0046625//sphingolipid binding; GO:0046983//protein dimerization activity; GO:0051861//glycolipid binding; GO:0097001//ceramide binding; GO:0097367//carbohydrate derivative binding; GO:0098772//molecular function regulator; GO:1905573//ganglioside GM1 binding; GO:1905574//ganglioside GM2 binding; GO:1905575//ganglioside GM3 binding; GO:1905576//ganglioside GT1b binding; GO:1905577//ganglioside GP1c binding
KEGG
K12382 | PSAP, SGP1
NR
RWR79018.1 prosaposin [Cinnamomum micranthum f. kanehirae]
Biological context

Connected feature records

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