Feature identity
- Identifier
- PaHa_c263g00280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,476 bp
- Genomic location
- unplaced_contig_263:35,484–37,396
- Strand
- +
Hass · mRNA
PaHa_c263g00280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,476
- bp
- unplaced_contig_263:35,484–37,396
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c263g00280
- eggNOG
- Preferred name: 28949773 | Seed ortholog: 1507870.A0A1V8SRS1 | COG: S | eggNOG OG: Whi5@131567|A-1*, Whi5@470018|YE-20, Whi5@4751|o-6
- Gene Ontology
- GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003714 transcription corepressor activity; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006357 regulation of transcription by RNA polymerase II; GO:0007089 traversing start control point of mitotic cell cycle; GO:0008361 regulation of cell size; GO:0010508 positive regulation of autophagy; GO:0033309 SBF transcription complex; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding
- KEGG
- KO: K12413 | Pathway: 04111 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c263g00280.1-protein
derives_fromgenePaHa_c263g00280
CDS
part_ofPaHa_c263g00280.1-CDS-unplaced_contig_263-1787993825:35484..35581CDS
part_ofPaHa_c263g00280.1-CDS-unplaced_contig_263-1787993825:35675..35863CDS
part_ofPaHa_c263g00280.1-CDS-unplaced_contig_263-1787993825:36046..36267CDS
part_ofPaHa_c263g00280.1-CDS-unplaced_contig_263-1787993825:36386..36641CDS
part_ofPaHa_c263g00280.1-CDS-unplaced_contig_263-1787993825:36686..37396exon
part_ofPaHa_c263g00280.1-exon-unplaced_contig_263-1787993825:35484..35581exon
part_ofPaHa_c263g00280.1-exon-unplaced_contig_263-1787993825:35675..35863exon
part_ofPaHa_c263g00280.1-exon-unplaced_contig_263-1787993825:36046..36267exon
part_ofPaHa_c263g00280.1-exon-unplaced_contig_263-1787993825:36386..36641exon
part_ofPaHa_c263g00280.1-exon-unplaced_contig_263-1787993825:36686..37396