Feature identity
- Identifier
- PaHa01g38860.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 726 bp
- Genomic location
- 1:92,887,574–92,897,717
- Strand
- −
Hass · mRNA
PaHa01g38860.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 726
- bp
- 1:92,887,574–92,897,717
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g38860
- eggNOG
- Preferred name: LOC103714369 | Seed ortholog: 337451.A0A3S3M8D5 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|Aje-24!, AP2@3193|WZ-18, AP2@33090|Ng-16, AP2@3398|AGP-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009737 response to abscisic acid; GO:0010286 heat acclimation
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g38860.1-protein
derives_frommRNAPaHa01g38860.1
mRNAPaHa01g38860.1
part_ofgenePaHa01g38860
CDS
part_ofPaHa01g38860.1-CDS-1-1787993825:92887574..92888282mRNAPaHa01g38860.1
CDS
part_ofPaHa01g38860.1-CDS-1-1787993825:92897701..92897717mRNAPaHa01g38860.1
exon
part_ofPaHa01g38860.1-exon-1-1787993825:92887574..92888282mRNAPaHa01g38860.1
exon
part_ofPaHa01g38860.1-exon-1-1787993825:92897701..92897717mRNAPaHa01g38860.1
