Feature identity
- Identifier
- PaHa01g38900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 588 bp
- Genomic location
- 1:92,988,770–92,992,098
- Strand
- +
Hass · mRNA
PaHa01g38900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 588
- bp
- 1:92,988,770–92,992,098
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g38900
- eggNOG
- Preferred name: YAB1 | Seed ortholog: 337451.A0A3S4NRK7 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Cc-11
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009909 regulation of flower development; GO:0009933 meristem structural organization; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0010093 specification of floral organ identity; GO:0010154 fruit development; GO:0010158 abaxial cell fate specification; GO:0010450 inflorescence meristem growth; GO:0045165 cell fate commitment; GO:0090706 specification of plant organ position; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
- KEGG
- KO: K25796 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g38900.1-protein
derives_frommRNAPaHa01g38900.1
mRNAPaHa01g38900.1
part_ofgenePaHa01g38900
CDS
part_ofPaHa01g38900.1-CDS-1-1787993825:92988770..92988862mRNAPaHa01g38900.1
CDS
part_ofPaHa01g38900.1-CDS-1-1787993825:92988981..92989136mRNAPaHa01g38900.1
CDS
part_ofPaHa01g38900.1-CDS-1-1787993825:92989245..92989359mRNAPaHa01g38900.1
CDS
part_ofPaHa01g38900.1-CDS-1-1787993825:92991875..92992098mRNAPaHa01g38900.1
exon
part_ofPaHa01g38900.1-exon-1-1787993825:92988770..92988862mRNAPaHa01g38900.1
exon
part_ofPaHa01g38900.1-exon-1-1787993825:92988981..92989136mRNAPaHa01g38900.1
exon
part_ofPaHa01g38900.1-exon-1-1787993825:92989245..92989359mRNAPaHa01g38900.1
exon
part_ofPaHa01g38900.1-exon-1-1787993825:92991875..92992098mRNAPaHa01g38900.1
