Feature identity
- Identifier
- PaHa_c292g00100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,126 bp
- Genomic location
- unplaced_contig_292:8,426–11,551
- Strand
- −
Hass · mRNA
PaHa_c292g00100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,126
- bp
- unplaced_contig_292:8,426–11,551
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c292g00100
- eggNOG
- Preferred name: alcR | Seed ortholog: 215243.A0A0D2AGZ0 | COG: S | eggNOG OG: Zn_clus@131567|A-1*, Zn_clus@2759|AjZ-21, Zn_clus@34395|Dmo-27
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006068 ethanol catabolic process; GO:0006338 chromatin remodeling; GO:0006567 L-threonine catabolic process; GO:0008270 zinc ion binding; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046187 acetaldehyde catabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c292g00100.1-protein
derives_fromgenePaHa_c292g00100
CDS
part_ofPaHa_c292g00100.1-CDS-unplaced_contig_292-1787993825:8426..11551exon
part_ofPaHa_c292g00100.1-exon-unplaced_contig_292-1787993825:8426..11551