Feature identity
- Identifier
- PaHa_c296g00210.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 5,340 bp
- Genomic location
- unplaced_contig_296:21,955–29,070
- Strand
- +
Hass · mRNA
PaHa_c296g00210.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 5,340
- bp
- unplaced_contig_296:21,955–29,070
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c296g00210
- eggNOG
- Preferred name: 20343815 | Seed ortholog: 675120.N1PEP6 | COG: S | eggNOG OG: Fungal_trans_2@131567|F-3, Fungal_trans_2@4751|KI-11, Zn_clus@131567|A-1*, Zn_clus@2759|Cwc-26, Zn_clus@4751|FPN-29
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:1900081 regulation of arginine catabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c296g00210.1-protein
derives_fromgenePaHa_c296g00210
CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:21955..22081CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:22528..22698CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:22780..23012CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:23190..25255CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:25326..26050CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:26230..27881CDS
part_ofPaHa_c296g00210.1-CDS-unplaced_contig_296-1787993825:28705..29070exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:21955..22081exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:22528..22698exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:22780..23012exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:23190..25255exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:25326..26050exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:26230..27881exon
part_ofPaHa_c296g00210.1-exon-unplaced_contig_296-1787993825:28705..29070