Anise · mRNA

Chr02.g18560.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,179
bp
Chr02:88,961,096–88,970,665
genomic location
Record overview

Feature identity

Identifier
Chr02.g18560.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,179 bp
Genomic location
Chr02:88,961,096–88,970,665
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008777032.1,S,[Squamosa promoter-binding-like protein]
Gene Ontology
Squamosa promoter-binding-like protein | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009908//flower development; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0048367//shoot system development; GO:0048437//floral organ development; GO:0048438//floral whorl development; GO:0048443//stamen development; GO:0048466//androecium development; GO:0048608//reproductive structure development; GO:0048653//anther development; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0090567//reproductive shoot system development; GO:0099402//plant organ development; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding
NR
QDC27800.1 SQUAMOSA promoter-binding protein-like 13 [Persea americana]
Swiss-Prot
Q49I55.1 RecName: Full=Teosinte glume architecture 1 [Zea mays]
Biological context

Connected feature records

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