Chr02.g12084.m1

Functional evidence

Functional index matched identifier: Chr02.g12084

eggNOG

29730.Gorai.009G172900.1,A,[Pre-mRNA-splicing factor]

Gene Ontology

Pre-mRNA-splicing factor | GO:0000349//generation of catalytic spliceosome for first transesterification step; GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000393//spliceosomal conformational changes to generate catalytic conformation; GO:0000398//mRNA splicing, via spliceosome; GO:0001701//in utero embryonic development; GO:0001824//blastocyst development; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006281//DNA repair; GO:0006283//transcription-coupled nucleotide-excision repair; GO:0006289//nucleotide-excision repair; GO:0006351//transcription, DNA-templated; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006974//cellular response to DNA damage stimulus; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009790//embryo development; GO:0009792//embryo development ending in birth or egg hatching; GO:0009987//cellular process; GO:0010467//gene expression; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0018130//heterocycle biosynthetic process; GO:0019438//aromatic compound biosynthetic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032774//RNA biosynthetic process; GO:0033554//cellular response to stress; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0043009//chordate embryonic development; GO:0043170//macromolecule metabolic process; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0046483//heterocycle metabolic process; GO:0048856//anatomical structure development; GO:0050896//response to stimulus; GO:0051716//cellular response to stimulus; GO:0065003//macromolecular complex assembly; GO:0071704//organic substance metabolic process; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0090304//nucleic acid metabolic process; GO:0097659//nucleic acid-templated transcription; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901576//organic substance biosynthetic process | GO:0000974//Prp19 complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005681//spliceosomal complex; GO:0005684//U2-type spliceosomal complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0071007//U2-type catalytic step 2 spliceosome; GO:0071010//prespliceosome; GO:0071012//catalytic step 1 spliceosome; GO:0071013//catalytic step 2 spliceosome; GO:0071014//post-mRNA release spliceosomal complex; GO:1902494//catalytic complex; GO:1990904//ribonucleoprotein complex | -

KEGG

K12867 | SYF1, XAB2

NR

KAE9461788.1 hypothetical protein C3L33_06288, partial [Rhododendron williamsianum]

Swiss-Prot

Q54Z08.1 RecName: Full=Pre-mRNA-splicing factor SYF1; AltName: Full=Protein XAB2 homolog [Dictyostelium discoideum]