Anise · mRNA

Chr01.g09712.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,562
bp
Chr01:98,797,758–98,800,319
genomic location
Record overview

Feature identity

Identifier
Chr01.g09712.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,562 bp
Genomic location
Chr01:98,797,758–98,800,319
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010244270.1,K,[transcription factor]
Gene Ontology
transcription factor | GO:0001101//response to acid chemical; GO:0006082//organic acid metabolic process; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006790//sulfur compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006952//defense response; GO:0006970//response to osmotic stress; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009617//response to bacterium; GO:0009620//response to fungus; GO:0009628//response to abiotic stimulus; GO:0009651//response to salt stress; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009739//response to gibberellin; GO:0009751//response to salicylic acid; GO:0009753//response to jasmonic acid; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009966//regulation of signal transduction; GO:0009967//positive regulation of signal transduction; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010038//response to metal ion; GO:0010200//response to chitin; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010646//regulation of cell communication; GO:0010647//positive regulation of cell communication; GO:0010928//regulation of auxin mediated signaling pathway; GO:0010929//positive regulation of auxin mediated signaling pathway; GO:0014070//response to organic cyclic compound; GO:0016143//S-glycoside metabolic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019748//secondary metabolic process; GO:0019757//glycosinolate metabolic process; GO:0019760//glucosinolate metabolic process; GO:0022622//root system development; GO:0023051//regulation of signaling; GO:0023056//positive regulation of signaling; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033993//response to lipid; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0042742//defense response to bacterium; GO:0043207//response to external biotic stimulus; GO:0043436//oxoacid metabolic process; GO:0044237//cellular metabolic process; GO:0044281//small molecule metabolic process; GO:0046677//response to antibiotic; GO:0046686//response to cadmium ion; GO:0047484//regulation of response to osmotic stress; GO:0048364//root development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048527//lateral root development; GO:0048528//post-embryonic root development; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:0080134//regulation of response to stress; GO:0090696//post-embryonic plant organ development; GO:0097305//response to alcohol; GO:0098542//defense response to other organism; GO:0099402//plant organ development; GO:1901000//regulation of response to salt stress; GO:1901001//negative regulation of response to salt stress; GO:1901135//carbohydrate derivative metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901657//glycosyl compound metabolic process; GO:1901698//response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000022//regulation of jasmonic acid mediated signaling pathway; GO:2000031//regulation of salicylic acid mediated signaling pathway; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001023//regulation of response to drug; GO:2001038//regulation of cellular response to drug; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR81404.1 transcription factor MYB44-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FDW1.1 RecName: Full=Transcription factor MYB44; AltName: Full=Myb-related protein 44; Short=AtMYB44; AltName: Full=Myb-related protein R1; Short=AtMYBR1 [Arabidopsis thaliana]
Biological context

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