Feature identity
- Identifier
- PaHa01g03890.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,176 bp
- Genomic location
- 1:4,981,346–4,986,368
- Strand
- −
Hass · mRNA
PaHa01g03890.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,176
- bp
- 1:4,981,346–4,986,368
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g03890
- eggNOG
- Preferred name: E2FE | Seed ortholog: 337451.A0A443NJG8 | eggNOG OG: E2F_TDP@131567|s-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0032876 negative regulation of DNA endoreduplication; GO:0042023 DNA endoreduplication
- KEGG
- KO: K09391 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g03890.1-protein
derives_frommRNAPaHa01g03890.1
mRNAPaHa01g03890.1
part_ofgenePaHa01g03890
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4981346..4981449mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4981940..4982321mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4982419..4982492mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4982582..4982654mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4982744..4982811mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4985361..4985502mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4985583..4985642mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4985826..4985903mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4985996..4986048mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4986141..4986208mRNAPaHa01g03890.1
CDS
part_ofPaHa01g03890.1-CDS-1-1787993825:4986295..4986368mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4981346..4981449mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4981940..4982321mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4982419..4982492mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4982582..4982654mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4982744..4982811mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4985361..4985502mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4985583..4985642mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4985826..4985903mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4985996..4986048mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4986141..4986208mRNAPaHa01g03890.1
exon
part_ofPaHa01g03890.1-exon-1-1787993825:4986295..4986368mRNAPaHa01g03890.1
