Feature identity
- Identifier
- PaHa_c354g00090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,512 bp
- Genomic location
- unplaced_contig_354:15,321–18,457
- Strand
- −
Hass · mRNA
PaHa_c354g00090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,512
- bp
- unplaced_contig_354:15,321–18,457
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c354g00090
- eggNOG
- Preferred name: SPBC660.15 | Seed ortholog: 383855.M2YU14 | COG: S | eggNOG OG: RRM_1@131567|Btk-26, RRM_1@2759|Liv-34
- Gene Ontology
- GO:0003730 mRNA 3'-UTR binding; GO:0005634 nucleus; GO:0005848 mRNA cleavage stimulating factor complex; GO:0180010 co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway
- KEGG
- KO: K14411 | Pathway: 03015 | BRITE: 00001, 03019
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c354g00090.1-protein
derives_fromgenePaHa_c354g00090
CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:15321..15443CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:15643..15713CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:16115..16982CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:17029..17141CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:17246..17286CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:18114..18377CDS
part_ofPaHa_c354g00090.1-CDS-unplaced_contig_354-1787993825:18426..18457exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:15321..15443exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:15643..15713exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:16115..16982exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:17029..17141exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:17246..17286exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:18114..18377exon
part_ofPaHa_c354g00090.1-exon-unplaced_contig_354-1787993825:18426..18457