Feature identity
- Identifier
- PaHa02g01940.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,107 bp
- Genomic location
- 2:3,483,501–3,495,356
- Strand
- +
Hass · mRNA
PaHa02g01940.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,107
- bp
- 2:3,483,501–3,495,356
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g01940
- eggNOG
- Preferred name: BHLH128 | Seed ortholog: 337451.A0A443N0G0 | COG: S | eggNOG OG: HLH@131567|pI-16, HLH@3398|AbA-19, HLH@58023|AMn-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0010119 regulation of stomatal movement; GO:0010629 negative regulation of gene expression; GO:0071215 cellular response to abscisic acid stimulus; GO:1902456 regulation of stomatal opening; GO:1903286 regulation of potassium ion import
- KEGG
- KO: K06054, K06055, K09087, K09088, K09089, K09090, K09091 | Pathway: 03460, 04330, 04950, 05165, 05169, 05200, 05224 | BRITE: 00001, 03000, 03019, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g01940.1-protein
derives_frommRNAPaHa02g01940.1
mRNAPaHa02g01940.1
part_ofgenePaHa02g01940
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3483501..3483936mRNAPaHa02g01940.1
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3486377..3486726mRNAPaHa02g01940.1
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3490190..3490321mRNAPaHa02g01940.1
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3491504..3491569mRNAPaHa02g01940.1
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3493933..3494001mRNAPaHa02g01940.1
CDS
part_ofPaHa02g01940.1-CDS-2-1787993825:3495303..3495356mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3483501..3483936mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3486377..3486726mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3490190..3490321mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3491504..3491569mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3493933..3494001mRNAPaHa02g01940.1
exon
part_ofPaHa02g01940.1-exon-2-1787993825:3495303..3495356mRNAPaHa02g01940.1
