Feature identity
- Identifier
- PaHa02g02650.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 765 bp
- Genomic location
- 2:4,697,136–4,699,914
- Strand
- +
Hass · mRNA
PaHa02g02650.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 765
- bp
- 2:4,697,136–4,699,914
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g02650
- eggNOG
- Preferred name: LOC104591615 | Seed ortholog: 337451.A0A3S3M8W9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|Rpy-49, Myb_DNA-binding@3193|IJM-41, Myb_DNA-binding@33090|Eca-37
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0071243 cellular response to arsenic-containing substance
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g02650.1-protein
derives_frommRNAPaHa02g02650.1
mRNAPaHa02g02650.1
part_ofgenePaHa02g02650
CDS
part_ofPaHa02g02650.1-CDS-2-1787993825:4697136..4697268mRNAPaHa02g02650.1
CDS
part_ofPaHa02g02650.1-CDS-2-1787993825:4699192..4699321mRNAPaHa02g02650.1
CDS
part_ofPaHa02g02650.1-CDS-2-1787993825:4699413..4699914mRNAPaHa02g02650.1
exon
part_ofPaHa02g02650.1-exon-2-1787993825:4697136..4697268mRNAPaHa02g02650.1
exon
part_ofPaHa02g02650.1-exon-2-1787993825:4699192..4699321mRNAPaHa02g02650.1
exon
part_ofPaHa02g02650.1-exon-2-1787993825:4699413..4699914mRNAPaHa02g02650.1
