Feature identity
- Identifier
- PaHa01g04580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,533 bp
- Genomic location
- 1:5,831,903–5,837,725
- Strand
- +
Hass · mRNA
PaHa01g04580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,533
- bp
- 1:5,831,903–5,837,725
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g04580
- eggNOG
- Preferred name: H0101F08.6 | Seed ortholog: 4432.A0A1U8BDF5 | COG: S | eggNOG OG: B3@131567|A-1*, B3@33090|AIM-20, B3@58023|Bms-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K09287 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g04580.1-protein
derives_frommRNAPaHa01g04580.1
mRNAPaHa01g04580.1
part_ofgenePaHa01g04580
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5831903..5832155mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5832780..5833052mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5833750..5834105mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5834658..5834747mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5835307..5835407mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5835961..5836007mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5836109..5836185mRNAPaHa01g04580.1
CDS
part_ofPaHa01g04580.1-CDS-1-1787993825:5837390..5837725mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5831903..5832155mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5832780..5833052mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5833750..5834105mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5834658..5834747mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5835307..5835407mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5835961..5836007mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5836109..5836185mRNAPaHa01g04580.1
exon
part_ofPaHa01g04580.1-exon-1-1787993825:5837390..5837725mRNAPaHa01g04580.1
