Feature identity
- Identifier
- PaHa02g05720.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,356 bp
- Genomic location
- 2:9,391,049–9,392,999
- Strand
- −
Hass · mRNA
PaHa02g05720.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,356
- bp
- 2:9,391,049–9,392,999
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g05720
- eggNOG
- Preferred name: MGP | Seed ortholog: 337451.A0A443N1D6 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|NKa-33
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009937 regulation of gibberellic acid mediated signaling pathway; GO:0010336 gibberellic acid homeostasis
- KEGG
- KO: K25869 | Pathway: 04391, 05168 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g05720.1-protein
derives_frommRNAPaHa02g05720.1
mRNAPaHa02g05720.1
part_ofgenePaHa02g05720
CDS
part_ofPaHa02g05720.1-CDS-2-1787993825:9391049..9391731mRNAPaHa02g05720.1
CDS
part_ofPaHa02g05720.1-CDS-2-1787993825:9392122..9392282mRNAPaHa02g05720.1
CDS
part_ofPaHa02g05720.1-CDS-2-1787993825:9392393..9392789mRNAPaHa02g05720.1
CDS
part_ofPaHa02g05720.1-CDS-2-1787993825:9392885..9392999mRNAPaHa02g05720.1
exon
part_ofPaHa02g05720.1-exon-2-1787993825:9391049..9391731mRNAPaHa02g05720.1
exon
part_ofPaHa02g05720.1-exon-2-1787993825:9392122..9392282mRNAPaHa02g05720.1
exon
part_ofPaHa02g05720.1-exon-2-1787993825:9392393..9392789mRNAPaHa02g05720.1
exon
part_ofPaHa02g05720.1-exon-2-1787993825:9392885..9392999mRNAPaHa02g05720.1
