Feature identity
- Identifier
- PaHa02g07270.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,839 bp
- Genomic location
- 2:11,586,563–11,594,762
- Strand
- −
Hass · mRNA
PaHa02g07270.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,839
- bp
- 2:11,586,563–11,594,762
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g07270
- eggNOG
- Preferred name: TCX5 | Seed ortholog: 337451.A0A443N1S7 | COG: S | eggNOG OG: TCR@131567|A-1*, TCR@2759|AP-7, TCR@3193|FG-14, TCR@3398|Fx-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21776 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g07270.1-protein
derives_frommRNAPaHa02g07270.1
mRNAPaHa02g07270.1
part_ofgenePaHa02g07270
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11586563..11586783mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11587173..11587598mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11589406..11589500mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11590060..11590160mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11590895..11591245mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11592289..11592466mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11593834..11593917mRNAPaHa02g07270.1
CDS
part_ofPaHa02g07270.1-CDS-2-1787993825:11594380..11594762mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11586563..11586783mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11587173..11587598mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11589406..11589500mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11590060..11590160mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11590895..11591245mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11592289..11592466mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11593834..11593917mRNAPaHa02g07270.1
exon
part_ofPaHa02g07270.1-exon-2-1787993825:11594380..11594762mRNAPaHa02g07270.1
