Feature identity
- Identifier
- PaHa02g10840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,398 bp
- Genomic location
- 2:17,808,645–17,818,665
- Strand
- −
Hass · mRNA
PaHa02g10840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,398
- bp
- 2:17,808,645–17,818,665
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g10840
- eggNOG
- Preferred name: LOC103705377 | Seed ortholog: 337451.A0A3S3N4R0 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Pn-15, bZIP_1@131567|B-2, bZIP_1@3398|Aoo-27, bZIP_1@35493|AEs-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048653 anther development; GO:0071588 hydrogen peroxide mediated signaling pathway
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g10840.1-protein
derives_frommRNAPaHa02g10840.1
mRNAPaHa02g10840.1
part_ofgenePaHa02g10840
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17808645..17808794mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17813837..17814076mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17816066..17816337mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17816444..17816513mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17816636..17816713mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17816833..17816892mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17816981..17817049mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17817300..17817422mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17817529..17817665mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17818249..17818346mRNAPaHa02g10840.1
CDS
part_ofPaHa02g10840.1-CDS-2-1787993825:17818565..17818665mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17808645..17808794mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17813837..17814076mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17816066..17816337mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17816444..17816513mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17816636..17816713mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17816833..17816892mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17816981..17817049mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17817300..17817422mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17817529..17817665mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17818249..17818346mRNAPaHa02g10840.1
exon
part_ofPaHa02g10840.1-exon-2-1787993825:17818565..17818665mRNAPaHa02g10840.1
