Feature identity
- Identifier
- PaHa02g15530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,272 bp
- Genomic location
- 2:29,016,106–29,026,307
- Strand
- +
Hass · mRNA
PaHa02g15530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,272
- bp
- 2:29,016,106–29,026,307
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g15530
- eggNOG
- Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum cell differentiation; GO:0048658 anther wall tapetum development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g15530.1-protein
derives_frommRNAPaHa02g15530.1
mRNAPaHa02g15530.1
part_ofgenePaHa02g15530
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29016106..29016756mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29016866..29017154mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29017474..29017541mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29019968..29020027mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29020130..29020171mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29021028..29021066mRNAPaHa02g15530.1
CDS
part_ofPaHa02g15530.1-CDS-2-1787993825:29026185..29026307mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29016106..29016756mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29016866..29017154mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29017474..29017541mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29019968..29020027mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29020130..29020171mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29021028..29021066mRNAPaHa02g15530.1
exon
part_ofPaHa02g15530.1-exon-2-1787993825:29026185..29026307mRNAPaHa02g15530.1
