Feature identity
- Identifier
- PaHa02g17630.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,700 bp
- Genomic location
- 2:36,441,293–36,467,525
- Strand
- −
Hass · mRNA
PaHa02g17630.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,700
- bp
- 2:36,441,293–36,467,525
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g17630
- eggNOG
- Preferred name: MED17 | Seed ortholog: 337451.A0A443NFW0 | COG: S | eggNOG OG: Med17@2759|A-1
- Gene Ontology
- GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0003712 transcription coregulator activity; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006974 DNA damage response; GO:0009640 photomorphogenesis; GO:0016592 mediator complex; GO:0035196 miRNA processing; GO:0042809 nuclear vitamin D receptor binding; GO:0046966 nuclear thyroid hormone receptor binding; GO:0061630 ubiquitin protein ligase activity; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K15133 | Pathway: 04919 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g17630.1-protein
derives_frommRNAPaHa02g17630.1
mRNAPaHa02g17630.1
part_ofgenePaHa02g17630
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36441293..36441514mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36441667..36441852mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36456063..36456123mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36456196..36456277mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36456381..36456576mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36460086..36460406mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36460841..36461314mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36463449..36463845mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36463935..36464020mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36464762..36464875mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36464954..36465152mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36465248..36465344mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36466258..36466372mRNAPaHa02g17630.1
CDS
part_ofPaHa02g17630.1-CDS-2-1787993825:36467376..36467525mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36441293..36441514mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36441667..36441852mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36456063..36456123mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36456196..36456277mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36456381..36456576mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36460086..36460406mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36460841..36461314mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36463449..36463845mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36463935..36464020mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36464762..36464875mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36464954..36465152mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36465248..36465344mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36466258..36466372mRNAPaHa02g17630.1
exon
part_ofPaHa02g17630.1-exon-2-1787993825:36467376..36467525mRNAPaHa02g17630.1
