Feature identity
- Identifier
- PaHa02g17750.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,260 bp
- Genomic location
- 2:37,049,806–37,059,225
- Strand
- −
Hass · mRNA
PaHa02g17750.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,260
- bp
- 2:37,049,806–37,059,225
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g17750
- eggNOG
- Preferred name: ARF2 | Seed ortholog: 337451.A0A443N3M7 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Auy-26, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|CF-11
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:0048481 plant ovule development; GO:1903288 positive regulation of potassium ion import across plasma membrane
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g17750.1-protein
derives_frommRNAPaHa02g17750.1
mRNAPaHa02g17750.1
part_ofgenePaHa02g17750
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37049806..37050046mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37055946..37056136mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37056769..37056795mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37056868..37057226mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37057342..37057513mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37057658..37057733mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37057839..37057955mRNAPaHa02g17750.1
CDS
part_ofPaHa02g17750.1-CDS-2-1787993825:37059149..37059225mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37049806..37050046mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37055946..37056136mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37056769..37056795mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37056868..37057226mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37057342..37057513mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37057658..37057733mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37057839..37057955mRNAPaHa02g17750.1
exon
part_ofPaHa02g17750.1-exon-2-1787993825:37059149..37059225mRNAPaHa02g17750.1
