Feature identity
- Identifier
- PaHa02g17760.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 603 bp
- Genomic location
- 2:37,059,308–37,062,014
- Strand
- −
Hass · mRNA
PaHa02g17760.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 603
- bp
- 2:37,059,308–37,062,014
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g17760
- eggNOG
- Preferred name: ARF2 | Seed ortholog: 3469.A0A4Y7JEV5 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Auy-26, AUX_IAA@41768|BVm-30, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|CF-11, Auxin_resp@41768|IE-15, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlK-27, B3@41768|DUD-35
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:0048481 plant ovule development; GO:1903288 positive regulation of potassium ion import across plasma membrane
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g17760.1-protein
derives_frommRNAPaHa02g17760.1
mRNAPaHa02g17760.1
part_ofgenePaHa02g17760
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37059308..37059313mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37059404..37059477mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37060182..37060266mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37060344..37060499mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37061135..37061191mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37061575..37061670mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37061777..37061889mRNAPaHa02g17760.1
CDS
part_ofPaHa02g17760.1-CDS-2-1787993825:37061999..37062014mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37059308..37059313mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37059404..37059477mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37060182..37060266mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37060344..37060499mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37061135..37061191mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37061575..37061670mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37061777..37061889mRNAPaHa02g17760.1
exon
part_ofPaHa02g17760.1-exon-2-1787993825:37061999..37062014mRNAPaHa02g17760.1
