Feature identity
- Identifier
- PaHa02g19480.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 531 bp
- Genomic location
- 2:51,016,658–51,017,549
- Strand
- −
Hass · mRNA
PaHa02g19480.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 531
- bp
- 2:51,016,658–51,017,549
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g19480
- eggNOG
- Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum cell differentiation; GO:0048658 anther wall tapetum development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g19480.1-protein
derives_frommRNAPaHa02g19480.1
mRNAPaHa02g19480.1
part_ofgenePaHa02g19480
CDS
part_ofPaHa02g19480.1-CDS-2-1787993825:51016658..51016951mRNAPaHa02g19480.1
CDS
part_ofPaHa02g19480.1-CDS-2-1787993825:51017235..51017348mRNAPaHa02g19480.1
CDS
part_ofPaHa02g19480.1-CDS-2-1787993825:51017427..51017549mRNAPaHa02g19480.1
exon
part_ofPaHa02g19480.1-exon-2-1787993825:51016658..51016951mRNAPaHa02g19480.1
exon
part_ofPaHa02g19480.1-exon-2-1787993825:51017235..51017348mRNAPaHa02g19480.1
exon
part_ofPaHa02g19480.1-exon-2-1787993825:51017427..51017549mRNAPaHa02g19480.1
