Feature identity
- Identifier
- PaHa02g20390.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 879 bp
- Genomic location
- 2:54,271,267–54,287,776
- Strand
- −
Hass · mRNA
PaHa02g20390.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 879
- bp
- 2:54,271,267–54,287,776
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g20390
- eggNOG
- Preferred name: LOC107892314 | Seed ortholog: 210143.A0A1R3JPA3 | COG: S | eggNOG OG: E2F_TDP@131567|s-6, E2F_TDP@1437201|Ph-22
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin
- KEGG
- KO: K09391 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g20390.1-protein
derives_frommRNAPaHa02g20390.1
mRNAPaHa02g20390.1
part_ofgenePaHa02g20390
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54271267..54271276mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54272551..54272632mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54275348..54275444mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54275673..54275732mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54275839..54275900mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54275999..54276072mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54276707..54276748mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54276793..54276803mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54279099..54279113mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54284257..54284301mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54284430..54284483mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54285354..54285385mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54287407..54287517mRNAPaHa02g20390.1
CDS
part_ofPaHa02g20390.1-CDS-2-1787993825:54287593..54287776mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54271267..54271276mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54272551..54272632mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54275348..54275444mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54275673..54275732mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54275839..54275900mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54275999..54276072mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54276707..54276748mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54276793..54276803mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54279099..54279113mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54284257..54284301mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54284430..54284483mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54285354..54285385mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54287407..54287517mRNAPaHa02g20390.1
exon
part_ofPaHa02g20390.1-exon-2-1787993825:54287593..54287776mRNAPaHa02g20390.1
