Feature identity
- Identifier
- PaHa02g21840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,290 bp
- Genomic location
- 2:61,850,311–61,853,392
- Strand
- −
Hass · mRNA
PaHa02g21840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,290
- bp
- 2:61,850,311–61,853,392
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g21840
- eggNOG
- Preferred name: LOC110804844 | Seed ortholog: 337451.A0A443Q454 | COG: S | eggNOG OG: Myb_DNA-binding@33090|B-2!, Myb_DNA-binding@35493|AH-8
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009266 response to temperature stimulus; GO:0009740 gibberellic acid mediated signaling pathway; GO:0034244 negative regulation of transcription elongation by RNA polymerase II; GO:0048579 negative regulation of long-day photoperiodism, flowering
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g21840.1-protein
derives_frommRNAPaHa02g21840.1
mRNAPaHa02g21840.1
part_ofgenePaHa02g21840
CDS
part_ofPaHa02g21840.1-CDS-2-1787993825:61850311..61850763mRNAPaHa02g21840.1
CDS
part_ofPaHa02g21840.1-CDS-2-1787993825:61851494..61851570mRNAPaHa02g21840.1
CDS
part_ofPaHa02g21840.1-CDS-2-1787993825:61852190..61852759mRNAPaHa02g21840.1
CDS
part_ofPaHa02g21840.1-CDS-2-1787993825:61853203..61853392mRNAPaHa02g21840.1
exon
part_ofPaHa02g21840.1-exon-2-1787993825:61850311..61850763mRNAPaHa02g21840.1
exon
part_ofPaHa02g21840.1-exon-2-1787993825:61851494..61851570mRNAPaHa02g21840.1
exon
part_ofPaHa02g21840.1-exon-2-1787993825:61852190..61852759mRNAPaHa02g21840.1
exon
part_ofPaHa02g21840.1-exon-2-1787993825:61853203..61853392mRNAPaHa02g21840.1
