Feature identity
- Identifier
- PaHa01g06380.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 621 bp
- Genomic location
- 1:8,490,191–8,500,715
- Strand
- +
Hass · mRNA
PaHa01g06380.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 621
- bp
- 1:8,490,191–8,500,715
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g06380
- eggNOG
- Preferred name: BZIP19 | Seed ortholog: 77586.A0A0D9VE89 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@33090|QU-15, bZIP_1@35493|nR-21, bZIP_1@4447|BHg-28, bZIP_1@4479|CJi-31
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K09043 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g06380.1-protein
derives_frommRNAPaHa01g06380.1
mRNAPaHa01g06380.1
part_ofgenePaHa01g06380
CDS
part_ofPaHa01g06380.1-CDS-1-1787993825:8490191..8490405mRNAPaHa01g06380.1
CDS
part_ofPaHa01g06380.1-CDS-1-1787993825:8492985..8493075mRNAPaHa01g06380.1
CDS
part_ofPaHa01g06380.1-CDS-1-1787993825:8493205..8493331mRNAPaHa01g06380.1
CDS
part_ofPaHa01g06380.1-CDS-1-1787993825:8500528..8500715mRNAPaHa01g06380.1
exon
part_ofPaHa01g06380.1-exon-1-1787993825:8490191..8490405mRNAPaHa01g06380.1
exon
part_ofPaHa01g06380.1-exon-1-1787993825:8492985..8493075mRNAPaHa01g06380.1
exon
part_ofPaHa01g06380.1-exon-1-1787993825:8493205..8493331mRNAPaHa01g06380.1
exon
part_ofPaHa01g06380.1-exon-1-1787993825:8500528..8500715mRNAPaHa01g06380.1
