Feature identity
- Identifier
- PaHa01g06390.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 780 bp
- Genomic location
- 1:8,505,890–8,509,043
- Strand
- +
Hass · mRNA
PaHa01g06390.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 780
- bp
- 1:8,505,890–8,509,043
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g06390
- eggNOG
- Preferred name: LOC101256655 | Seed ortholog: 542762.A0A4S4EEX4 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@1437183|CzN-33, bZIP_1@33090|QU-15, bZIP_1@35493|nR-21
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K09043 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g06390.1-protein
derives_frommRNAPaHa01g06390.1
mRNAPaHa01g06390.1
part_ofgenePaHa01g06390
CDS
part_ofPaHa01g06390.1-CDS-1-1787993825:8505890..8506293mRNAPaHa01g06390.1
CDS
part_ofPaHa01g06390.1-CDS-1-1787993825:8508141..8508231mRNAPaHa01g06390.1
CDS
part_ofPaHa01g06390.1-CDS-1-1787993825:8508466..8508592mRNAPaHa01g06390.1
CDS
part_ofPaHa01g06390.1-CDS-1-1787993825:8508886..8509043mRNAPaHa01g06390.1
exon
part_ofPaHa01g06390.1-exon-1-1787993825:8505890..8506293mRNAPaHa01g06390.1
exon
part_ofPaHa01g06390.1-exon-1-1787993825:8508141..8508231mRNAPaHa01g06390.1
exon
part_ofPaHa01g06390.1-exon-1-1787993825:8508466..8508592mRNAPaHa01g06390.1
exon
part_ofPaHa01g06390.1-exon-1-1787993825:8508886..8509043mRNAPaHa01g06390.1
