Feature identity
- Identifier
- PaHa02g22960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,244 bp
- Genomic location
- 2:67,224,993–67,232,393
- Strand
- −
Hass · mRNA
PaHa02g22960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,244
- bp
- 2:67,224,993–67,232,393
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g22960
- eggNOG
- Preferred name: LOC103706858 | Seed ortholog: 337451.A0A3S3NQX4 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@35493|DQI-27, START@131567|e-5, START@2759|CM-9!, START@35493|tQ-19
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010062 negative regulation of trichoblast fate specification; GO:0043565 sequence-specific DNA binding; GO:0090628 plant epidermal cell fate specification
- KEGG
- KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g22960.1-protein
derives_frommRNAPaHa02g22960.1
mRNAPaHa02g22960.1
part_ofgenePaHa02g22960
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67224993..67225373mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67225561..67225647mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67225732..67226003mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67226236..67226410mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67226794..67227003mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67227606..67227707mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67228089..67228475mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67229607..67229804mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67230652..67230769mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67231989..67232224mRNAPaHa02g22960.1
CDS
part_ofPaHa02g22960.1-CDS-2-1787993825:67232316..67232393mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67224993..67225373mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67225561..67225647mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67225732..67226003mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67226236..67226410mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67226794..67227003mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67227606..67227707mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67228089..67228475mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67229607..67229804mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67230652..67230769mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67231989..67232224mRNAPaHa02g22960.1
exon
part_ofPaHa02g22960.1-exon-2-1787993825:67232316..67232393mRNAPaHa02g22960.1
