Feature identity
- Identifier
- PaHa02g27010.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,050 bp
- Genomic location
- 2:75,215,965–75,247,446
- Strand
- +
Hass · mRNA
PaHa02g27010.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,050
- bp
- 2:75,215,965–75,247,446
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g27010
- eggNOG
- Preferred name: BnaC04g47990D | Seed ortholog: 4432.A0A1U8BFW0 | COG: S | eggNOG OG: Ank@131221|AHc-21, Ank@131567|Hf-12, Ank@2759|Nl-14, Ank@3398|DBo-27, zf-CCCH@131567|Abo-26, zf-CCCH@1437183|Der-35, zf-CCCH@58023|DJE-34
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:1902074 response to salt
- KEGG
- EC: ec:2.3.2.27, ec:2.7.11.1 | KO: K03695, K08834, K12487, K14405, K21952, K23047, K23048 | Pathway: 03015, 04144, 04213, 04814 | BRITE: 00001, 01000, 01001, 03019, 03037, 03110, 04121, 04131, 04812
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g27010.1-protein
derives_frommRNAPaHa02g27010.1
mRNAPaHa02g27010.1
part_ofgenePaHa02g27010
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75215965..75218042mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75218802..75218857mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75222752..75222829mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75232559..75232636mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75240044..75240148mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75240320..75240364mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75240831..75240902mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75240947..75241016mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75241726..75241847mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75242152..75242355mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75242509..75242702mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75243225..75243360mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75244263..75244359mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75244525..75244625mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75245270..75245433mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75245918..75245989mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75246141..75246257mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75246375..75246470mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75246580..75246701mRNAPaHa02g27010.1
CDS
part_ofPaHa02g27010.1-CDS-2-1787993825:75247404..75247446mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75215965..75218042mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75218802..75218857mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75222752..75222829mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75232559..75232636mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75240044..75240148mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75240320..75240364mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75240831..75240902mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75240947..75241016mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75241726..75241847mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75242152..75242355mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75242509..75242702mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75243225..75243360mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75244263..75244359mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75244525..75244625mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75245270..75245433mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75245918..75245989mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75246141..75246257mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75246375..75246470mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75246580..75246701mRNAPaHa02g27010.1
exon
part_ofPaHa02g27010.1-exon-2-1787993825:75247404..75247446mRNAPaHa02g27010.1
