Feature identity
- Identifier
- PaHa02g30130.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,698 bp
- Genomic location
- 2:80,660,844–80,706,769
- Strand
- −
Hass · mRNA
PaHa02g30130.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,698
- bp
- 2:80,660,844–80,706,769
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g30130
- eggNOG
- Preferred name: LOC100827950 | Seed ortholog: 337451.A0A3S3MCT0 | COG: COG2814 | eggNOG OG: MFS_1@131567|AFC-18, MFS_1@3398|WFo-36, OATP@131567|C-2!
- Gene Ontology
- GO:0001782 B cell homeostasis; GO:0002260 lymphocyte homeostasis; GO:0002920 regulation of humoral immune response; GO:0003376 sphingosine-1-phosphate receptor signaling pathway; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006665 sphingolipid metabolic process; GO:0006869 lipid transport; GO:0006914 autophagy; GO:0007605 sensory perception of sound; GO:0009507 chloroplast; GO:0030148 sphingolipid biosynthetic process; GO:0033700 phospholipid efflux; GO:0043029 T cell homeostasis; GO:0046624 sphingolipid intramembrane carrier activity; GO:0048073 regulation of eye pigmentation; GO:0048535 lymph node development; GO:0051977 lysophospholipid transport; GO:0051978 lysophospholipid:sodium symporter activity; GO:0060348 bone development; GO:0072676 lymphocyte migration; GO:0090398 cellular senescence; GO:0097352 autophagosome maturation; GO:1905671 regulation of lysosome organization; GO:2000404 regulation of T cell migration
- KEGG
- EC: ec:2.7.1.32, ec:2.7.1.82 | KO: K23677 | Pathway: 00564, 01100 | Module: M00090, M00092 | BRITE: 00001, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g30130.1-protein
derives_frommRNAPaHa02g30130.1
mRNAPaHa02g30130.1
part_ofgenePaHa02g30130
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80660844..80660968mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80662154..80662232mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80665347..80665475mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80667888..80668007mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80669695..80669808mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80674268..80674344mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80674754..80674851mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80682895..80682976mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80685088..80685153mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80685621..80685723mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80692283..80692357mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80694847..80694922mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80696210..80696314mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80696470..80696571mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80700801..80700932mRNAPaHa02g30130.1
CDS
part_ofPaHa02g30130.1-CDS-2-1787993825:80706555..80706769mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80660844..80660968mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80662154..80662232mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80665347..80665475mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80667888..80668007mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80669695..80669808mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80674268..80674344mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80674754..80674851mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80682895..80682976mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80685088..80685153mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80685621..80685723mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80692283..80692357mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80694847..80694922mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80696210..80696314mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80696470..80696571mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80700801..80700932mRNAPaHa02g30130.1
exon
part_ofPaHa02g30130.1-exon-2-1787993825:80706555..80706769mRNAPaHa02g30130.1
