Feature identity
- Identifier
- PaHa02g30480.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 333 bp
- Genomic location
- 2:81,354,465–81,355,362
- Strand
- −
Hass · mRNA
PaHa02g30480.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 333
- bp
- 2:81,354,465–81,355,362
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g30480
- eggNOG
- Preferred name: LOC107941799 | Seed ortholog: 3775.A0A1Q3CYW6 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|LF-13, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|CHg-29, SRF-TF@35493|jX-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010440 stomatal lineage progression; GO:0042803 protein homodimerization activity; GO:0048586 regulation of long-day photoperiodism, flowering
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g30480.1-protein
derives_frommRNAPaHa02g30480.1
mRNAPaHa02g30480.1
part_ofgenePaHa02g30480
CDS
part_ofPaHa02g30480.1-CDS-2-1787993825:81354465..81354483mRNAPaHa02g30480.1
CDS
part_ofPaHa02g30480.1-CDS-2-1787993825:81354582..81354718mRNAPaHa02g30480.1
CDS
part_ofPaHa02g30480.1-CDS-2-1787993825:81354946..81354987mRNAPaHa02g30480.1
CDS
part_ofPaHa02g30480.1-CDS-2-1787993825:81355094..81355135mRNAPaHa02g30480.1
CDS
part_ofPaHa02g30480.1-CDS-2-1787993825:81355270..81355362mRNAPaHa02g30480.1
exon
part_ofPaHa02g30480.1-exon-2-1787993825:81354465..81354483mRNAPaHa02g30480.1
exon
part_ofPaHa02g30480.1-exon-2-1787993825:81354582..81354718mRNAPaHa02g30480.1
exon
part_ofPaHa02g30480.1-exon-2-1787993825:81354946..81354987mRNAPaHa02g30480.1
exon
part_ofPaHa02g30480.1-exon-2-1787993825:81355094..81355135mRNAPaHa02g30480.1
exon
part_ofPaHa02g30480.1-exon-2-1787993825:81355270..81355362mRNAPaHa02g30480.1
