Feature identity
- Identifier
- PaHa02g35350.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 540 bp
- Genomic location
- 2:89,068,888–89,075,890
- Strand
- −
Hass · mRNA
PaHa02g35350.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 540
- bp
- 2:89,068,888–89,075,890
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g35350
- eggNOG
- Preferred name: LOC103719190 | Seed ortholog: 337451.A0A443N7J6 | COG: S | eggNOG OG: TFIIIC_sub6@2759|A-1
- Gene Ontology
- GO:0000127 transcription factor TFIIIC complex; GO:0003674 molecular_function; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0016604 nuclear body; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III
- KEGG
- KO: K15203 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g35350.1-protein
derives_frommRNAPaHa02g35350.1
mRNAPaHa02g35350.1
part_ofgenePaHa02g35350
CDS
part_ofPaHa02g35350.1-CDS-2-1787993825:89068888..89069068mRNAPaHa02g35350.1
CDS
part_ofPaHa02g35350.1-CDS-2-1787993825:89071230..89071365mRNAPaHa02g35350.1
CDS
part_ofPaHa02g35350.1-CDS-2-1787993825:89071995..89072046mRNAPaHa02g35350.1
CDS
part_ofPaHa02g35350.1-CDS-2-1787993825:89073965..89074015mRNAPaHa02g35350.1
CDS
part_ofPaHa02g35350.1-CDS-2-1787993825:89075771..89075890mRNAPaHa02g35350.1
exon
part_ofPaHa02g35350.1-exon-2-1787993825:89068888..89069068mRNAPaHa02g35350.1
exon
part_ofPaHa02g35350.1-exon-2-1787993825:89071230..89071365mRNAPaHa02g35350.1
exon
part_ofPaHa02g35350.1-exon-2-1787993825:89071995..89072046mRNAPaHa02g35350.1
exon
part_ofPaHa02g35350.1-exon-2-1787993825:89073965..89074015mRNAPaHa02g35350.1
exon
part_ofPaHa02g35350.1-exon-2-1787993825:89075771..89075890mRNAPaHa02g35350.1
