Feature identity
- Identifier
- PaHa01g16170
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 906 bp
- Genomic location
- 1:26,322,926–26,324,420
- Strand
- +
Hass · gene
PaHa01g16170
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 906
- bp
- 1:26,322,926–26,324,420
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC110793892 | Seed ortholog: 337451.A0A3S3M9X9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|PIe-47, Myb_DNA-binding@35493|KPp-43
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009409 response to cold; GO:0009411 response to UV; GO:0009414 response to water deprivation; GO:0009416 response to light stimulus; GO:0009637 response to blue light; GO:0009646 response to absence of light; GO:0009651 response to salt stress; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009744 response to sucrose; GO:0010118 stomatal movement; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0080148 negative regulation of response to water deprivation; GO:1901141 regulation of lignin biosynthetic process; GO:1902074 response to salt
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa01g16170.1
part_ofgenePaHa01g16170
