Feature identity
- Identifier
- PaHa01g08170.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,098 bp
- Genomic location
- 1:11,574,830–11,578,567
- Strand
- −
Hass · mRNA
PaHa01g08170.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,098
- bp
- 1:11,574,830–11,578,567
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g08170
- eggNOG
- Preferred name: WRKY55 | Seed ortholog: 337451.A0A3S3N1K0 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Z-5, WRKY@3398|PD-16
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0010468 regulation of gene expression; GO:0043565 sequence-specific DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g08170.1-protein
derives_frommRNAPaHa01g08170.1
mRNAPaHa01g08170.1
part_ofgenePaHa01g08170
CDS
part_ofPaHa01g08170.1-CDS-1-1787993825:11574830..11575277mRNAPaHa01g08170.1
CDS
part_ofPaHa01g08170.1-CDS-1-1787993825:11576355..11576486mRNAPaHa01g08170.1
CDS
part_ofPaHa01g08170.1-CDS-1-1787993825:11578050..11578567mRNAPaHa01g08170.1
exon
part_ofPaHa01g08170.1-exon-1-1787993825:11574830..11575277mRNAPaHa01g08170.1
exon
part_ofPaHa01g08170.1-exon-1-1787993825:11576355..11576486mRNAPaHa01g08170.1
exon
part_ofPaHa01g08170.1-exon-1-1787993825:11578050..11578567mRNAPaHa01g08170.1
