Hass · gene

PaHa01g33870

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

723
bp
1:84,196,776–84,217,451
genomic location
Record overview

Feature identity

Identifier
PaHa01g33870
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
723 bp
Genomic location
1:84,196,776–84,217,451
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: MADS6 | Seed ortholog: 337451.A0A443NQY7 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|EM-10, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|BFm-26, SRF-TF@35493|bP-19
Gene Ontology
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009553 embryo sac development; GO:0009555 pollen development; GO:0010022 meristem determinacy; GO:0010093 specification of floral organ identity; GO:0010094 specification of carpel identity; GO:0010468 regulation of gene expression; GO:0010582 floral meristem determinacy; GO:0045893 positive regulation of DNA-templated transcription; GO:0046983 protein dimerization activity; GO:0048316 seed development; GO:0048437 floral organ development; GO:0048449 floral organ formation; GO:0048455 stamen formation; GO:0048457 floral whorl morphogenesis; GO:0048459 floral whorl structural organization; GO:0048481 plant ovule development; GO:0048509 regulation of meristem development; GO:0048833 specification of floral organ number; GO:0080060 integument development; GO:0080112 seed growth
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.