Feature identity
- Identifier
- PaHa02g43200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,977 bp
- Genomic location
- 2:100,740,688–100,745,556
- Strand
- +
Hass · mRNA
PaHa02g43200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,977
- bp
- 2:100,740,688–100,745,556
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g43200
- eggNOG
- Preferred name: RR21 | Seed ortholog: 337451.A0A443N987 | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|Bhp-32, Response_reg|WPCHNL@131567, Response_reg|WPCHNL@3193
- Gene Ontology
- GO:0000156 phosphorelay response regulator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0009736 cytokinin-activated signaling pathway; GO:0042802 identical protein binding
- KEGG
- KO: K14491 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g43200.1-protein
derives_frommRNAPaHa02g43200.1
mRNAPaHa02g43200.1
part_ofgenePaHa02g43200
CDS
part_ofPaHa02g43200.1-CDS-2-1787993825:100740688..100740868mRNAPaHa02g43200.1
CDS
part_ofPaHa02g43200.1-CDS-2-1787993825:100742681..100742833mRNAPaHa02g43200.1
CDS
part_ofPaHa02g43200.1-CDS-2-1787993825:100742922..100743323mRNAPaHa02g43200.1
CDS
part_ofPaHa02g43200.1-CDS-2-1787993825:100743533..100743609mRNAPaHa02g43200.1
CDS
part_ofPaHa02g43200.1-CDS-2-1787993825:100744393..100745556mRNAPaHa02g43200.1
exon
part_ofPaHa02g43200.1-exon-2-1787993825:100740688..100740868mRNAPaHa02g43200.1
exon
part_ofPaHa02g43200.1-exon-2-1787993825:100742681..100742833mRNAPaHa02g43200.1
exon
part_ofPaHa02g43200.1-exon-2-1787993825:100742922..100743323mRNAPaHa02g43200.1
exon
part_ofPaHa02g43200.1-exon-2-1787993825:100743533..100743609mRNAPaHa02g43200.1
exon
part_ofPaHa02g43200.1-exon-2-1787993825:100744393..100745556mRNAPaHa02g43200.1
