Feature identity
- Identifier
- PaHa03g00620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 762 bp
- Genomic location
- 3:2,554,925–2,558,752
- Strand
- −
Hass · mRNA
PaHa03g00620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 762
- bp
- 3:2,554,925–2,558,752
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g00620
- eggNOG
- Preferred name: LOC104609081 | Seed ortholog: 337451.A0A443N9P0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|DyJ-28, HLH@33090|AAF-17, HLH@35493|Aps-20
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response to phosphate starvation; GO:0140297 DNA-binding transcription factor binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g00620.1-protein
derives_frommRNAPaHa03g00620.1
mRNAPaHa03g00620.1
part_ofgenePaHa03g00620
CDS
part_ofPaHa03g00620.1-CDS-3-1787993825:2554925..2555014mRNAPaHa03g00620.1
CDS
part_ofPaHa03g00620.1-CDS-3-1787993825:2556053..2556223mRNAPaHa03g00620.1
CDS
part_ofPaHa03g00620.1-CDS-3-1787993825:2556909..2557148mRNAPaHa03g00620.1
CDS
part_ofPaHa03g00620.1-CDS-3-1787993825:2557957..2558119mRNAPaHa03g00620.1
CDS
part_ofPaHa03g00620.1-CDS-3-1787993825:2558655..2558752mRNAPaHa03g00620.1
exon
part_ofPaHa03g00620.1-exon-3-1787993825:2554925..2555014mRNAPaHa03g00620.1
exon
part_ofPaHa03g00620.1-exon-3-1787993825:2556053..2556223mRNAPaHa03g00620.1
exon
part_ofPaHa03g00620.1-exon-3-1787993825:2556909..2557148mRNAPaHa03g00620.1
exon
part_ofPaHa03g00620.1-exon-3-1787993825:2557957..2558119mRNAPaHa03g00620.1
exon
part_ofPaHa03g00620.1-exon-3-1787993825:2558655..2558752mRNAPaHa03g00620.1
