Feature identity
- Identifier
- PaHa03g01450.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,398 bp
- Genomic location
- 3:3,893,987–3,896,936
- Strand
- −
Hass · mRNA
PaHa03g01450.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,398
- bp
- 3:3,893,987–3,896,936
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g01450
- eggNOG
- Preferred name: LOC104603172 | Seed ortholog: 337451.A0A3S3N9M7 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apr-24, AP2@33090|Xs-18, AP2@3398|CFq-27, AP2@58023|BJE-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009791 post-embryonic development; GO:0009845 seed germination; GO:0010311 lateral root formation; GO:0040019 positive regulation of embryonic development; GO:0048364 root development; GO:0060771 phyllotactic patterning; GO:0060772 leaf phyllotactic patterning; GO:1905392 plant organ morphogenesis; GO:1990110 callus formation
- KEGG
- KO: K09285 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g01450.1-protein
derives_frommRNAPaHa03g01450.1
mRNAPaHa03g01450.1
part_ofgenePaHa03g01450
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3893987..3894609mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3895223..3895299mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3895389..3895439mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3895544..3895617mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3895723..3895811mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3896292..3896374mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3896448..3896754mRNAPaHa03g01450.1
CDS
part_ofPaHa03g01450.1-CDS-3-1787993825:3896843..3896936mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3893987..3894609mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3895223..3895299mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3895389..3895439mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3895544..3895617mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3895723..3895811mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3896292..3896374mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3896448..3896754mRNAPaHa03g01450.1
exon
part_ofPaHa03g01450.1-exon-3-1787993825:3896843..3896936mRNAPaHa03g01450.1
