Hass · gene

PaHa03g03740

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,232
bp
3:7,734,326–7,742,101
genomic location
Record overview

Feature identity

Identifier
PaHa03g03740
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
2,232 bp
Genomic location
3:7,734,326–7,742,101
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ARR12 | Seed ortholog: 337451.A0A443NAD7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|BNt-31, Myb_DNA-binding@3398|Bho-32, Response_reg|AT38GL@131567, Response_reg|AT38GL@1437183, Response_reg|AT38GL@2759, Response_reg|AT38GL@33090
Gene Ontology
GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated signaling pathway; GO:0010082 regulation of root meristem growth; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010492 maintenance of shoot apical meristem identity; GO:0031537 regulation of anthocyanin metabolic process; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development; GO:0048367 shoot system development; GO:0048576 positive regulation of short-day photoperiodism, flowering; GO:0071368 cellular response to cytokinin stimulus; GO:0080022 primary root development; GO:0080036 regulation of cytokinin-activated signaling pathway; GO:0080113 regulation of seed growth; GO:1990110 callus formation
KEGG
KO: K14491 | Pathway: 04075 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.