Hass · gene

PaHa03g11640

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

825
bp
3:24,226,953–24,235,014
genomic location
Record overview

Feature identity

Identifier
PaHa03g11640
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
825 bp
Genomic location
3:24,226,953–24,235,014
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: BnaA03g55310D | Seed ortholog: 337451.A0A443NC66 | COG: COG1680 | eggNOG OG: EF-hand_6@131567|AF-6, EF-hand_6@2759|HP-10, EF-hand_6@33090|Ahb-21
Gene Ontology
GO:0002020 protease binding; GO:0005102 signaling receptor binding; GO:0005246 calcium channel regulator activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0009610 response to symbiotic fungus; GO:0016020 membrane; GO:0016529 sarcoplasmic reticulum; GO:0030018 Z disc; GO:0030127 COPII vesicle coat; GO:0030315 T-tubule; GO:0030424 axon; GO:0031463 Cul3-RING ubiquitin ligase complex; GO:0031982 vesicle; GO:0042584 chromaffin granule membrane; GO:0042802 identical protein binding; GO:0043679 axon terminus; GO:0044325 transmembrane transporter binding; GO:0044326 dendritic spine neck; GO:0046982 protein heterodimerization activity; GO:0046983 protein dimerization activity; GO:0048306 calcium-dependent protein binding; GO:0070062 extracellular exosome; GO:0140297 DNA-binding transcription factor binding; GO:0140311 protein sequestering activity; GO:0140416 transcription regulator inhibitor activity; GO:1990756 ubiquitin-like ligase-substrate adaptor activity
KEGG
KO: K13448 | Pathway: 04626 | BRITE: 00001
Biological context

Connected feature records

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