Feature identity
- Identifier
- PaHa03g29500
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,114 bp
- Genomic location
- 3:77,974,863–78,020,955
- Strand
- −
Hass · gene
PaHa03g29500
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,114
- bp
- 3:77,974,863–78,020,955
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC107933378 | Seed ortholog: 3983.A0A2C9URN2 | COG: S | eggNOG OG: HA2@131567|Ay-8, HA2@1437183|Lys-43, HA2@2759|TJ-16, Helicase_C|KFC4E0@2759, Helicase_C|KFC4E0@3398, OB_NTP_bind@131567|C-2, OB_NTP_bind@2759|YK-17, OB_NTP_bind@3398|CUn-30
- Gene Ontology
- GO:0000182 rDNA binding; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003725 double-stranded RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008186 ATP-dependent activity, acting on RNA; GO:0008380 RNA splicing; GO:0009793 embryo development ending in seed dormancy; GO:0016020 membrane; GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing; GO:0038187 pattern recognition receptor activity; GO:0042802 identical protein binding; GO:0043023 ribosomal large subunit binding; GO:0043130 ubiquitin binding; GO:0060090 molecular adaptor activity; GO:0140297 DNA-binding transcription factor binding
- KEGG
- EC: ec:5.6.2.6 | KO: K12813 | Pathway: 03040 | BRITE: 00001, 01000, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa03g29500.1
part_ofgenePaHa03g29500
