Hass · gene

PaHa03g32120

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,518
bp
3:82,657,889–82,680,192
genomic location
Record overview

Feature identity

Identifier
PaHa03g32120
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,518 bp
Genomic location
3:82,657,889–82,680,192
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC106759980 | Seed ortholog: 337451.A0A443NG07 | COG: S | eggNOG OG: BAH@131567|A-1*, BAH@1437183|LF-14, BAH@2759|BL-9
Gene Ontology
GO:0000118 histone deacetylase complex; GO:0001217 DNA-binding transcription repressor activity; GO:0001222 transcription corepressor binding; GO:0001708 cell fate specification; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003713 transcription coactivator activity; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0006338 chromatin remodeling; GO:0006357 regulation of transcription by RNA polymerase II; GO:0007155 cell adhesion; GO:0007163 establishment or maintenance of cell polarity; GO:0007498 mesoderm development; GO:0008150 biological_process; GO:0008544 epidermis development; GO:0009786 regulation of asymmetric cell division; GO:0009792 embryo development ending in birth or egg hatching; GO:0010171 body morphogenesis; GO:0010220 positive regulation of vernalization response; GO:0016055 Wnt signaling pathway; GO:0016581 NuRD complex; GO:0016604 nuclear body; GO:0018991 egg-laying behavior; GO:0019899 enzyme binding; GO:0021549 cerebellum development; GO:0021691 cerebellar Purkinje cell layer maturation; GO:0021930 cerebellar granule cell precursor proliferation; GO:0021942 radial glia guided migration of Purkinje cell; GO:0030334 regulation of cell migration; GO:0031581 hemidesmosome assembly; GO:0034244 negative regulation of transcription elongation by RNA polymerase II; GO:0040036 regulation of fibroblast growth factor receptor signaling pathway; GO:0045138 nematode male tail tip morphogenesis; GO:0045814 negative regulation of gene expression, epigenetic; GO:0045879 negative regulation of smoothened signaling pathway; GO:0048755 branching morphogenesis of a nerve; GO:0048813 dendrite morphogenesis; GO:0048839 inner ear development; GO:0051216 cartilage development; GO:0060037 pharyngeal system development; GO:0060290 transdifferentiation; GO:0060536 cartilage morphogenesis; GO:0061386 closure of optic fissure; GO:0061628 histone H3K27me3 reader activity; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0140566 histone reader activity; GO:2000028 regulation of photoperiodism, flowering
KEGG
EC: ec:2.7.7.7 | KO: K02350 | BRITE: 00001, 01000, 01612, 03400
Biological context

Connected feature records

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