Hass · gene

PaHa03g35960

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,320
bp
3:88,875,194–88,877,709
genomic location
Record overview

Feature identity

Identifier
PaHa03g35960
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,320 bp
Genomic location
3:88,875,194–88,877,709
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104603455 | Seed ortholog: 337451.A0A3S3MJX8 | COG: S | eggNOG OG: HLH@131567|pI-16, HLH@58023|AMo-18!
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006808 regulation of nitrogen utilization; GO:0006970 response to osmotic stress; GO:0007623 circadian rhythm; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009416 response to light stimulus; GO:0009737 response to abscisic acid; GO:0010119 regulation of stomatal movement; GO:0010378 temperature compensation of the circadian clock; GO:0010468 regulation of gene expression; GO:0042803 protein homodimerization activity; GO:0043562 cellular response to nitrogen levels; GO:0048573 photoperiodism, flowering; GO:0071215 cellular response to abscisic acid stimulus; GO:0160062 cutin-based cuticle development; GO:1902074 response to salt; GO:1902456 regulation of stomatal opening; GO:1903286 regulation of potassium ion import; GO:2000028 regulation of photoperiodism, flowering
KEGG
KO: K06054, K06055, K09087, K09088, K09089, K09090, K09091 | Pathway: 03460, 04330, 04950, 05165, 05169, 05200, 05224 | BRITE: 00001, 03000, 03019, 03400
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.