Feature identity
- Identifier
- PaHa03g07610.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,776 bp
- Genomic location
- 3:14,809,599–14,819,089
- Strand
- +
Hass · mRNA
PaHa03g07610.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,776
- bp
- 3:14,809,599–14,819,089
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g07610
- eggNOG
- Preferred name: LOC125752051 | Seed ortholog: 337451.A0A443NBF2 | COG: S | eggNOG OG: NUFIP1@2759|A-1
- Gene Ontology
- GO:0000027 ribosomal large subunit assembly; GO:0000492 box C/D snoRNP assembly; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005726 perichromatin fibrils; GO:0005730 nucleolus; GO:0006396 RNA processing; GO:0008023 transcription elongation factor complex; GO:0008150 biological_process; GO:0016363 nuclear matrix; GO:0030515 snoRNA binding; GO:0030674 protein-macromolecule adaptor activity; GO:0032991 protein-containing complex; GO:0034517 ribophagy; GO:0042802 identical protein binding; GO:0043022 ribosome binding; GO:0045202 synapse; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048786 presynaptic active zone; GO:0051117 ATPase binding; GO:0070761 pre-snoRNP complex; GO:0180023 cytosolic large ribosomal subunit assembly
- KEGG
- KO: K14404 | Pathway: 03015 | BRITE: 00001, 03019, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g07610.1-protein
derives_frommRNAPaHa03g07610.1
mRNAPaHa03g07610.1
part_ofgenePaHa03g07610
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14809599..14809679mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14809950..14810235mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14810321..14810406mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14810529..14810781mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14810897..14810952mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14812763..14812863mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14812945..14813021mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14816878..14816950mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14817604..14817694mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14817792..14817827mRNAPaHa03g07610.1
CDS
part_ofPaHa03g07610.1-CDS-3-1787993825:14818454..14819089mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14809599..14809679mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14809950..14810235mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14810321..14810406mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14810529..14810781mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14810897..14810952mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14812763..14812863mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14812945..14813021mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14816878..14816950mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14817604..14817694mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14817792..14817827mRNAPaHa03g07610.1
exon
part_ofPaHa03g07610.1-exon-3-1787993825:14818454..14819089mRNAPaHa03g07610.1
